Long Iso-Seq data for Siamang from Lymphoblastoid cell lines - SRA

SRX22859077: Long Iso-Seq data for Siamang from Lymphoblastoid cell lines
1 PACBIO_SMRT (Sequel II) run: 967,363 spots, 2.9G bases, 1.4Gb downloads

Design: RNA was extarcted from cultured siamang lymphoblast Jambi and processed following manufacturer's instruction.

Submitted by: Penn State University

Study: Long- and short-read RNA sequencing for ape genome annotation

PRJNA1016395 • SRP477373 • All experiments • All runs

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Long-read (PacBio Iso-Seq) and short-read (Illumina-based RNA-seq) RNA sequencing were performed for the purpose of genome annotation. The target genomes are cell lines sequenced for telomere-to-telomere genome references: bonobo (Pan paniscus), chimpanzee (Pan troglodytes), gorilla (Gorilla gorilla), Sumatran orangutan (Pongo abelii), Bornean orangutan (Pongo pygmaeus), siamang (Symphalangus syndactylus), and hoolock (Hoolock leuconedys).

Sample: Symphalangus syndactylus (Jambi) Cell Line

SAMN30216103 • SRS18242897 • All experiments • All runs

Organism: Symphalangus syndactylus

Library:

Name: mSymSyn1_IsoSeq_long

Instrument: Sequel II

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: PCR

Layout: SINGLE

Runs: 1 run, 967,363 spots, 2.9G bases, 1.4Gb

Run	# of Spots	# of Bases	Size	Published
SRR27178655	967,363	2.9G	1.4Gb	2023-12-11

ID:: 30908519

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